Applied and Environmental Microbiology - Texas A&M University (TAMU) Scholar

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Distinct Depth-Discrete Profiles of Microbial Communities and Geochemical Insights in the Subsurface Critical Zone.. 89:e0050023-e00523. 2023
A Longitudinal Study on the Dynamics of Salmonella enterica Prevalence and Serovar Composition in Beef Cattle Feces and Lymph Nodes and Potential Contributing Sources from the Feedlot Environment.. 89:e0003323-e00023. 2023
Combined Quantification and Deep Serotyping for Salmonella Risk Profiling in Broiler Flocks.. 89:e0203522-e02022. 2023
Microbial Community Dynamics Provide Evidence for Hypoxia during a Coral Reef Mortality Event.. 88:e0034722-e00322. 2022
Type IX Secretion System Effectors and Virulence of the Model Flavobacterium columnare Strain MS-FC-4.. 88:e0170521-e01721. 2022
Microbial Abundance and Diversity in Subsurface Lower Oceanic Crust at Atlantis Bank, Southwest Indian Ridge.. 87:e0151921-e01521. 2021
The Type IX Secretion System Is Required for Virulence of the Fish Pathogen Flavobacterium psychrophilum.. 86:e00799-e00720. 2020
Population Dynamics of Salmonella enterica within Beef Cattle Cohorts Followed from Single-Dose Metaphylactic Antibiotic Treatment until Slaughter.. 85:e01386-e01319. 2019
Bacillus thuringiensis Cry1Da_7 and Cry1B.868 Protein Interactions with Novel Receptors Allow Control of Resistant Fall Armyworms, Spodoptera frugiperda (J.E. Smith).. 85:e00579-e00519. 2019
Metabolites Involved in Aerobic Degradation of the A and B Rings of Estrogen.. 85:e02223-e02218. 2019
Pseudomonas chlororaphis Produces Multiple R-Tailocin Particles That Broaden the Killing Spectrum and Contribute to Persistence in Rhizosphere Communities.. 84:e01230-e01218. 2018
Serotype Diversity and Antimicrobial Resistance among Salmonella enterica Isolates from Patients at an Equine Referral Hospital.. 84:e02829-e02817. 2018
Carbon Amendments Alter Microbial Community Structure and Net Mercury Methylation Potential in Sediments.. 84:e01049-e01017. 2018
Pseudomonas chlororaphis Produces Two Distinct R-Tailocins That Contribute to Bacterial Competition in Biofilms and on Roots.. 83:e00706-e00717. 2017
A Broad-Host-Range Tailocin from Burkholderia cenocepacia.. 83:e03414-e03416. 2017
Imaging of Borrelia turicatae Producing the Green Fluorescent Protein Reveals Persistent Colonization of the Ornithodoros turicata Midgut and Salivary Glands from Nymphal Acquisition through Transmission.. 83:e02503-e02516. 2017
Avian migrants facilitate invasions of neotropical ticks and tick-borne pathogens into the United States.. 81:8366-8378. 2015
New Insight into Microbial Iron Oxidation as Revealed by the Proteomic Profile of an Obligate Iron-Oxidizing Chemolithoautotroph.. 81:5927-5937. 2015
Multifactorial effects of ambient temperature, precipitation, farm management, and environmental factors determine the level of generic Escherichia coli contamination on preharvested spinach.. 81:2635-2650. 2015
Efficient metabolic exchange and electron transfer within a syntrophic trichloroethene-degrading coculture of Dehalococcoides mccartyi 195 and Syntrophomonas wolfei.. 81:2015-2024. 2015
Adaptation genomics of a small-colony variant in a Pseudomonas chlororaphis 30-84 biofilm.. 81:890-899. 2015
Effect of proximity to a cattle feedlot on Escherichia coli O157:H7 contamination of leafy greens and evaluation of the potential for airborne transmission.. 81:1101-1110. 2015
Simultaneous quantification of active carbon- and nitrogen-fixing communities and estimation of fixation rates using fluorescence in situ hybridization and flow cytometry.. 80:6750-6759. 2014
Bacillaene and sporulation protect Bacillus subtilis from predation by Myxococcus xanthus.. 80:5603-5610. 2014
Extracellular enzyme activity and microbial diversity measured on seafloor exposed basalts from Loihi seamount indicate the importance of basalts to global biogeochemical cycling.. 80:4854-4864. 2014
Investigating microbial eukaryotic diversity from a global census: insights from a comparison of pyrotag and full-length sequences of 18S rRNA genes.. 80:4363-4373. 2014
Superoxide production by a manganese-oxidizing bacterium facilitates iodide oxidation.. 80:2693-2699. 2014
Farm management, environment, and weather factors jointly affect the probability of spinach contamination by generic Escherichia coli at the preharvest stage.. 80:2504-2515. 2014
Sustainable growth of Dehalococcoides mccartyi 195 by corrinoid salvaging and remodeling in defined lactate-fermenting consortia.. 80:2133-2141. 2014
Extracellular Enzyme Activity and Microbial Diversity Measured on Seafloor Exposed Basalts from Loihi Seamount Indicate the Importance of Basalts to Global Biogeochemical Cycling. 80:4854-4864. 2014
Oxidation of the cyclic ethers 1,4-dioxane and tetrahydrofuran by a monooxygenase in two Pseudonocardia species.. 79:7702-7708. 2013
Role of bacterial communities in the natural suppression of Rhizoctonia solani bare patch disease of wheat (Triticum aestivum L.).. 79:7428-7438. 2013
Diet complexity and estrogen receptor status affect the composition of the murine intestinal microbiota.. 79:5763-5773. 2013
Generic Escherichia coli contamination of spinach at the preharvest stage: effects of farm management and environmental factors.. 79:4347-4358. 2013
Site-directed mutations in the lanthipeptide mutacin 1140.. 79:4015-4023. 2013
Susceptibility of murine norovirus and hepatitis A virus to electron beam irradiation in oysters and quantifying the reduction in potential infection risks.. 79:3796-3801. 2013
Evaluation of Phytate-Degrading Lactobacillus Culture Administration to Broiler Chickens. 80:943-950. 2013
Probing the role of sigma interaction and energetics in the catalytic efficiency of endo-1,4--xylanase.. 78:8817-8821. 2012
Versatility in corrinoid salvaging and remodeling pathways supports corrinoid-dependent metabolism in Dehalococcoides mccartyi.. 78:7745-7752. 2012
Association of nucleotide polymorphisms within the O-antigen gene cluster of Escherichia coli O26, O45, O103, O111, O121, and O145 with serogroups and genetic subtypes.. 78:6689-6703. 2012
NasT-mediated antitermination plays an essential role in the regulation of the assimilatory nitrate reductase operon in Azotobacter vinelandii.. 78:6558-6567. 2012
Two boundaries separate Borrelia burgdorferi populations in North America.. 78:6059-6067. 2012
Requirement of siderophore biosynthesis for plant colonization by Salmonella enterica.. 78:4561-4570. 2012
Global transcriptomic and proteomic responses of Dehalococcoides ethenogenes strain 195 to fixed nitrogen limitation.. 78:1424-1436. 2012
Quantifying the reduction in potential health risks by determining the sensitivity of poliovirus type 1 chat strain and rotavirus SA-11 to electron beam irradiation of iceberg lettuce and spinach.. 78:988-993. 2012
Selective utilization of exogenous amino acids by Dehalococcoides ethenogenes strain 195 and its effects on growth and dechlorination activity.. 77:7797-7803. 2011
Spontaneous Gac mutants of Pseudomonas biological control strains: cheaters or mutualists?. 77:7227-7235. 2011
Prevalence and genotypic characteristics of Clostridium difficile in a closed and integrated human and swine population.. 77:5755-5760. 2011
Dynamics of Microbial Community Composition and Function during In Situ Bioremediation of a Uranium-Contaminated Aquifer (vol 77, pg 3860, 2011). 77:5063-5063. 2011
Effects of bacterial microflora of the lower digestive tract of free-range waterfowl on influenza virus activation.. 77:4119-4125. 2011
Dynamics of microbial community composition and function during in situ bioremediation of a uranium-contaminated aquifer.. 77:3860-3869. 2011
Isolation from animal tissue and genetic transformation of Coxiella burnetii are facilitated by an improved axenic growth medium.. 77:3720-3725. 2011
Diverse Borrelia burgdorferi strains in a bird-tick cryptic cycle.. 77:1999-2007. 2011
Iodide accumulation by aerobic bacteria isolated from subsurface sediments of a 129I-contaminated aquifer at the Savannah River site, South Carolina.. 77:2153-2160. 2011
The multifactorial basis for plant health promotion by plant-associated bacteria.. 77:1548-1555. 2011
Diversity of the fsr-gelE region of the Enterococcus faecalis genome but conservation in strains with partial deletions of the fsr operon.. 77:442-451. 2011
Genomic and functional analyses of Rhodococcus equi phages ReqiPepy6, ReqiPoco6, ReqiPine5, and ReqiDocB7.. 77:669-683. 2011
Significant association between sulfate-reducing bacteria and uranium-reducing microbial communities as revealed by a combined massively parallel sequencing-indicator species approach.. 76:6778-6786. 2010
Regulation of morphogenesis and biocontrol properties in Trichoderma virens by a VELVET protein, Vel1.. 76:2345-2352. 2010
Evidence for nitrogen fixation by "Dehalococcoides ethenogenes" strain 195.. 75:7551-7555. 2009
The olive fly endosymbiont, "Candidatus Erwinia dacicola," switches from an intracellular existence to an extracellular existence during host insect development.. 75:7097-7106. 2009
Flow-based microfluidic device for quantifying bacterial chemotaxis in stable, competing gradients.. 75:4557-4564. 2009
Climate and tick seasonality are predictors of Borrelia burgdorferi genotype distribution.. 75:2476-2483. 2009
Longitudinal study of antimicrobial resistance among Escherichia coli isolates from integrated multisite cohorts of humans and swine.. 74:3672-3681. 2008
Microbial communities in contaminated sediments, associated with bioremediation of uranium to submicromolar levels.. 74:3718-3729. 2008
Comparative genomics of "Dehalococcoides ethenogenes" 195 and an enrichment culture containing unsequenced "Dehalococcoides" strains.. 74:3533-3540. 2008
Quantifying genes and transcripts to assess the in situ physiology of "Dehalococcoides" spp. in a trichloroethene-contaminated groundwater site.. 74:2728-2739. 2008
Temporal transcriptomic microarray analysis of "Dehalococcoides ethenogenes" strain 195 during the transition into stationary phase.. 74:2864-2872. 2008
Root infection and systemic colonization of maize by Colletotrichum graminicola.. 74:823-832. 2008
An inducible propane monooxygenase is responsible for N-nitrosodimethylamine degradation by Rhodococcus sp. strain RHA1.. 73:6930-6938. 2007
Enterohemorrhagic Escherichia coli biofilms are inhibited by 7-hydroxyindole and stimulated by isatin.. 73:4100-4109. 2007
Influence of vitamin B12 and cocultures on the growth of Dehalococcoides isolates in defined medium.. 73:2847-2853. 2007
Microarray-based analysis of microbial community RNAs by whole-community RNA amplification.. 73:563-571. 2007
Tvbgn3, a beta-1,6-glucanase from the biocontrol fungus Trichoderma virens, is involved in mycoparasitism and control of Pythium ultimum.. 72:7661-7670. 2006
Discrimination of multiple Dehalococcoides strains in a trichloroethene enrichment by quantification of their reductive dehalogenase genes.. 72:5877-5883. 2006
Reductive dehalogenase gene expression as a biomarker for physiological activity of Dehalococcoides spp.. 72:6161-6168. 2006
Transcriptional expression of the tceA gene in a Dehalococcoides-containing microbial enrichment.. 71:7145-7151. 2005
An internal reference technique for accurately quantifying specific mRNAs by real-time PCR with application to the tceA reductive dehalogenase gene.. 71:3866-3871. 2005
Genomic organization and molecular analysis of virulent bacteriophage 2972 infecting an exopolysaccharide-producing Streptococcus thermophilus strain.. 71:4057-4068. 2005
Quantitative molecular assay for fingerprinting microbial communities of wastewater and estrogen-degrading consortia.. 71:1433-1444. 2005
Use of artificial neural networks to accurately identify Cryptosporidium oocyst and Giardia cyst images.. 71:80-84. 2005
Effect of pyocyanin on a crude-oil-degrading microbial community.. 70:4004-4011. 2004
Negative cross-communication among wheat rhizosphere bacteria: effect on antibiotic production by the biological control bacterium Pseudomonas aureofaciens 30-84.. 70:3103-3109. 2004
Effect of pyocyanin on a crude-oil-degrading microbial community. 70:4004-4011. 2004
Intraspecific diversity of Vibrio vulnificus in Galveston Bay water and oysters as determined by randomly amplified polymorphic DNA PCR.. 69:3170-3175. 2003
Identification of new genes positively regulated by Tri10 and a regulatory network for trichothecene mycotoxin production.. 69:2731-2736. 2003
Coupling of bacterial endosymbiont and host mitochondrial genomes in the hydrothermal vent clam Calyptogena magnifica.. 69:2058-2064. 2003
Tri1 encodes the cytochrome P450 monooxygenase for C-8 hydroxylation during trichothecene biosynthesis in Fusarium sporotrichioides and resides upstream of another new Tri gene.. 69:1607-1613. 2003
Survival of GacS/GacA mutants of the biological control bacterium Pseudomonas aureofaciens 30-84 in the wheat rhizosphere.. 68:3308-3314. 2002
Identification of Cryptosporidium parvum oocysts by an artificial neural network approach.. 68:1115-1121. 2002
A Novel Regulatory Gene, Tri10, Controls Trichothecene Toxin Production and Gene Expression. 67:5294-5302. 2001
A novel regulatory gene, Tri10, controls trichothecene toxin production and gene expression.. 67:5294-5302. 2001
A second quorum-sensing system regulates cell surface properties but not phenazine antibiotic production in Pseudomonas aureofaciens.. 67:4305-4315. 2001
Regulation of fumonisin B(1) biosynthesis and conidiation in Fusarium verticillioides by a cyclin-like (C-type) gene, FCC1.. 67:1607-1612. 2001
Comparison of 2,4-dichlorophenoxyacetic acid degradation and plasmid transfer in soil resulting from bioaugmentation with two different pJP4 donors.. 66:3399-3407. 2000
2,4,6-trinitrotoluene reduction by carbon monoxide dehydrogenase from Clostridium thermoaceticum.. 66:1474-1478. 2000
Development of a selective medium for isolation of Helicobacter pylori from cattle and beef samples.. 66:723-727. 2000
Requirement of monooxygenase-mediated steps for sterigmatocystin biosynthesis by Aspergillus nidulans.. 66:359-362. 2000
Two-component transcriptional regulation of N-acyl-homoserine lactone production in Pseudomonas aureofaciens.. 65:2294-2299. 1999
Evaluation of toxic effects of aeration and trichloroethylene oxidation on methanotrophic bacteria grown with different nitrogen sources.. 65:766-772. 1999
Effect of nitrogen source on growth and trichloroethylene degradation by methane-oxidizing bacteria.. 64:3451-3457. 1998
Comparison of C18-carboxypropylbetaine and glass bead DNA extraction methods for detection of Mycobacterium bovis in bovine milk samples and analysis of samples by PCR.. 64:3099-3101. 1998
Delineating the specific influence of virus isoelectric point and size on virus adsorption and transport through sandy soils.. 64:405-410. 1998
Endophytic fungi in indigenous Australasian grasses associated with toxicity to livestock.. 64:601-606. 1998
Diversity of the ribulose bisphosphate carboxylase/oxygenase form I gene (rbcL) in natural phytoplankton communities.. 63:3600-3606. 1997
Biodegradation of individual and multiple chlorinated aliphatic hydrocarbons by methane-oxidizing cultures.. 62:3371-3377. 1996
Occurrence of airborne bacteria and pathogen indicators during land application of sewage sludge.. 62:296-299. 1996
Differential secretion of isoforms of Serratia marcescens extracellular nuclease.. 61:4083-4088. 1995
Gene cloning, sequence analysis, purification, and secretion by Escherichia coli of an extracellular lipase from Serratia marcescens.. 61:2674-2680. 1995
Identification of capsule-forming Bacillus anthracis spores with the PCR and a novel dual-probe hybridization format.. 60:1622-1625. 1994
Specific detection of Salmonella spp. by multiplex polymerase chain reaction.. 59:1473-1479. 1993
Seasonal Dynamics of Bacterial Colonization of Cotton Fiber and Effects of Moisture on Growth of Bacteria within the Cotton Boll.. 59:974-980. 1993
Degradation of Degradable Starch-Polyethylene Plastics in a Compost Environment. 59:1155-1161. 1993
Use of an exotic carbon source to selectively increase metabolic activity and growth of Pseudomonas putida in soil. 59:2056-2063. 1993
Cloning, expression, and nucleotide sequence of genes involved in production of pediocin PA-1, and bacteriocin from Pediococcus acidilactici PAC1.0.. 58:2360-2367. 1992
Contribution of phenazine antibiotic biosynthesis to the ecological competence of fluorescent pseudomonads in soil habitats.. 58:2616-2624. 1992
Characterization of a methane-utilizing bacterium from a bacterial consortium that rapidly degrades trichloroethylene and chloroform.. 58:1886-1893. 1992
Polymerase chain reaction and gene probe detection of the 2,4-dichlorophenoxyacetic acid degradation plasmid, pJP4.. 58:1271-1275. 1992
Biochemical and serological characterization of Carnobacterium spp. isolated from farmed and natural populations of striped bass and catfish.. 57:3114-3120. 1991
Genetic analysis of the antifungal activity of a soilborne Pseudomonas aureofaciens strain.. 57:2928-2934. 1991
Rapid method for processing soil samples for polymerase chain reaction amplification of specific gene sequences.. 57:2283-2286. 1991
Use of an A-T-rich DNA clone for identification and detection of Peronosclerospora sorghi.. 57:2027-2032. 1991
Product toxicity and cometabolic competitive inhibition modeling of chloroform and trichloroethylene transformation by methanotrophic resting cells.. 57:1031-1037. 1991
Production of the antibiotic phenazine-1-carboxylic acid by fluorescent Pseudomonas species in the rhizosphere of wheat. 56:908-912. 1990
Evidence for plasmid linkage of raffinose utilization and associated -galactosidase and sucrose hydrolase activity in Pediococcus pentosaceus. 51:105-109. 1986
Isolation and characterization of linear DNA elements from the Mitochondria of Gaeumannomyces graminis. 52:924-929. 1986
Metabolism of aflatoxin B1 by rat hepatic microsomes induced by polyhalogenated biphenyl congeners.. 49:882-886. 1985
Transfer of sucrose-fermenting ability and nisin production phenotype among lactic streptococci. 49:627-633. 1985
Ochratoxin A-induced teratogenesis in rats: partial protection by phenylalanine.. 48:1186-1188. 1984
Identification and enumeration of marine chroococcoid cyanobacteria by immunofluorescence.. 46:553-559. 1983
Plasmid transfer in Pediococcus spp.: intergeneric and intrageneric transfer of pIP501.. 46:81-89. 1983
Iron-chelating compounds produced by soil pseudomonads: Correlation with fungal growth inhibition. 46:128-132. 1983
Bacterial growth in ground beef prepared from electrically stimulated and nonstimulated muscles.. 41:915-918. 1981
Short-term effects of South louisiana and kuwait crude oils on glucose utilization by marine bacterial populations.. 40:341-345. 1980
Microbial biomass and activity distribution in an anoxic, hypersaline basin.. 37:466-470. 1979
Enhanced virus replication in mammalian cells exposed to commercial emulsifiers.. 35:297-300. 1978

Applied and Environmental Microbiology Journal

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