HR job title
- Professor
- Contact Info
- ORCiD
- 0000-0002-6194-0421
Alvarado-Bremer, Jaime Professor
Positions
- Associate Professor, Rangeland, Wildlife and Fisheries Management, College of Agriculture and Life Sciences
- Professor, Marine Biology (Galveston), Texas A&M University at Galveston
- Overview
- Publications
- Research
- Teaching
- Works By Students
- Background
- Contact
- Other
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Overview
Publications
selected publications
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academic article
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Wells, R., Quesnell, V. A., Humphreys, R. L., Dewar, H., Rooker, J. R., Alvarado Bremer, J., & Snodgrass, O. E.
(2021).
Nursery origin and population connectivity of swordfish Xiphias gladius in the North Pacific Ocean. Journal of Fish Biology.
99(2), 354-363.
-
Sepulveda, C. A., Wang, M., Aalbers, S. A., & Alvarado-Bremer, J. R.
(2020).
Insights into the horizontal movements, migration patterns, and stock affiliation of California swordfish. Fisheries Oceanography.
29(2), 152-168.
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Pearrubia, L., Vias, J., Sanz, N., Smith, B. L., Bremer, J., Pla, C., & Vidal, O.
(2019).
SNP identification and validation in two invasive species: zebra mussel (Dreissena polymorpha) and Asian clam (Corbicula fluminea). Animal Biodiversity and Conservation.
42(1), 65-68.
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Laurrabaquio-A, N. S., Islas-Villanueva, V., Adams, D. H., Uribe-Alcocer, M., Alvarado-Bremer, J. R., & Daz-Jaimes, P.
(2019).
Genetic evidence for regional philopatry of the Bull Shark (Carcharhinus leucas), to nursery areas in estuaries of the Gulf of Mexico and western North Atlantic ocean. Fisheries Research.
209, 67-74.
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Espinoza, G. J., & Alvarado Bremer, J. R.
(2019).
Genetic species identification of ecologically important planthoppers (Prokelisia spp.) of coastal Spartina saltmarshes using High Resolution Melting Analysis (HRMA). Scientific Reports.
9(1), 20073.
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Cornic, M., Smith, B. L., Kitchens, L. L., Bremer, J., & Rooker, J. R.
(2018).
Abundance and habitat associations of tuna larvae in the surface water of the Gulf of Mexico. Hydrobiologia: the international journal on limnology and marine sciences.
806(1), 29-46.
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McKenzie, J. L., & Alvarado Bremer, J. R.
(2017).
Genetic identification of istiophorid larvae from the Gulf of Mexico based on the analysis of mitochondrial DNA control region sequences. Journal of Fish Biology.
90(3), 1070-1079.
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Espinoza, G. J., Poland, J. M., & Bremer, J.
(2017).
Genotyping live fish larvae: Non-lethal and noninvasive DNA isolation from 3-5 day old hatchlings. BioTechniques.
63(4), 181-186.
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Lu, C., Smith, B. L., Hinton, M. G., & Bremer, J.
(2016).
Bayesian analyses of Pacific swordfish (Xiphias gladius L.) genetic differentiation using multilocus single nucleotide polymorphism (SNP) data. Journal of Experimental Marine Biology and Ecology.
482, 1-17.
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Lu, C., Bremer, J., McKenzie, J. L., & Chiang, W.
(2015).
Analysis of sailfish (Istiophorus platypterus) population structure in the North Pacific Ocean. Fisheries Research.
166, 33-38.
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Cruscanti, M., Innocenti, G., Alvarado Bremer, J., & Galil, B. S.
(2015).
First report of the brown shrimp Penaeus aztecus Ives, 1891 (Crustacea, Decapoda, Penaeidae) in the Tyrrhenian Sea. The Journal of the Marine Biological Association of the United Kingdom.
8.
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Alvarado Bremer, J. R., Smith, B. L., Moulton, D. L., Lu, C., & Cornic, M.
(2014).
Shake and stew: a non-destructive PCR-ready DNA isolation method from a single preserved fish larva. Journal of Fish Biology.
84(1), 267-272.
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Smith, B. L., Lu, C., & Alvarado Bremer, J. R.
(2013).
Methodological streamlining of SNP discovery and genotyping via high-resolution melting analysis (HRMA) in non-model species. Marine Genomics.
9, 39-49.
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Snchez, P., Vias, J., Alvarado Bremer, J. R., Ambrosio, P. P., & Flos, R.
(2012).
Loss of genetic variability in a hatchery strain of Senegalese sole (Solea senegalensis) revealed by sequence data of the mitochondrial DNA control region and microsatellite markers. Scientia Marina: international journal on marine sciences.
76(2), 225-235.
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Ditty, J. G., & Bremer, J.
(2011).
Species Discrimination of Postlarvae and Early Juvenile Brown Shrimp (Farfantepenaeus aztecus) and Pink Shrimp (F. duorarum) (Decapoda: Penaeidae): Coupling Molecular Genetics and Comparative Morphology to Identify Early Life Stages. Journal of Crustacean Biology.
31(1), 126-137.
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Vias, J., Prez-Serra, A., Vidal, O., Bremer, J., & Pla, C.
(2010).
Genetic differentiation between eastern and western Mediterranean swordfish revealed by phylogeographic analysis of the mitochondrial DNA control region. ICES Journal of Marine Science: journal du conseil.
67(6), 1222-1229.
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Vias, J., Bremer, J., & Pla, C.
(2010).
Phylogeography and phylogeny of the epineritic cosmopolitan bonitos of the genus Sarda (Cuvier): inferred patterns of intra and interoceanic connectivity derived from nuclear and mitochondrial DNA data. Journal of Biogeography.
37(3), 557-570.
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Bremer, J., Ditty, J. G., Turner, J. S., & Saxton, B. L.
(2010).
Molecular species identification of commercially important penaeid shrimp from the Gulf of Mexico using a multiplex haplotype-specific PCR assay. Biochemical Systematics and Ecology.
38(4), 715-721.
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Smith, B. L., Lu, C., & Alvarado Bremer, J. R.
(2010).
High-resolution melting analysis (HRMA): a highly sensitive inexpensive genotyping alternative for population studies. Molecular Ecology Resources.
10(1), 193-196.
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Alvarado Bremer, J. R., Vias, J., Mejuto, J., Ely, B., & Pla, C.
(2005).
Comparative phylogeography of Atlantic bluefin tuna and swordfish: the combined effects of vicariance, secondary contact, introgression, and population expansion on the regional phylogenies of two highly migratory pelagic fishes. Molecular Phylogenetics and Evolution.
36(1), 169-187.
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Bremer, J., Frisk, M. G., Miller, T. J., Turner, J., Vias, J., & Kwil, K.
(2005).
Genetic identification of cryptic juveniles of little skate and winter skate. Journal of Fish Biology.
66(4), 1177-1182.
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Ely, B., Vias, J., Alvarado Bremer, J. R., Black, D., Lucas, L., Covello, K., Labrie, A. V., & Thelen, E.
(2005).
Consequences of the historical demography on the global population structure of two highly migratory cosmopolitan marine fishes: the yellowfin tuna (Thunnus albacares) and the skipjack tuna (Katsuwonus pelamis). BMC Ecology.
5(1), 19-19.
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Bremer, J., Mejuto, J., Gmez-Mrquez, J., Bon, F., Carpintero, P., Rodrguez, J. M., ... Ely, B.
(2005).
Hierarchical analyses of genetic variation of samples from breeding and feeding grounds confirm the genetic partitioning of northwest Atlantic and South Atlantic populations of swordfish (Xiphias gladius L.). Journal of Experimental Marine Biology and Ecology.
327(2), 167-182.
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Vias, J., Alvarado Bremer, J. R., & Pla, C.
(2004).
Inter-oceanic genetic differentiation among albacore (Thunnus alalunga) populations. Marine Biology.
145(2), 225-232.
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Vias, J., Alvarado Bremer, J., & Pla, C.
(2004).
Phylogeography of the Atlantic bonito (Sarda sarda) in the northern Mediterranean: the combined effects of historical vicariance, population expansion, secondary invasion, and isolation by distance. Molecular Phylogenetics and Evolution.
33(1), 32-42.
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Ely, B., Stoner, D. S., Bremer, A., Dean, J. M., Addis, P., Cau, A., ... Quattro, J. M.
(2002).
Analyses of nuclear ldhA gene and mtDNA control region sequences of Atlantic northern bluefin tuna populations. Marine Biotechnology.
4(6), 583-588.
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Alvarado Bremer, J. R., Stequert, B., Robertson, N. W., & Ely, B.
(1998).
Genetic evidence for inter-oceanic subdivision of bigeye tuna (Thunnus obesus) populations. Marine Biology.
132(4), 547-557.
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Alvarado Bremer, J.
(1997).
Orthodox and unorthodox phylogenetic relationships among tunas revealed by the nucleotide sequence analysis of the mitochondrial DNA control region,. Journal of Fish Biology.
50(3), 540-554.
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Alvarado Bremer, J. R., Baker, A. J., & Mejuto, J.
(1995).
Mitochondrial DNA control region sequences indicate extensive mixing of swordfish (Xiphias gladius) populations in the Atlantic Ocean. 52(8), 1720-1732.
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Wells, R., Quesnell, V. A., Humphreys, R. L., Dewar, H., Rooker, J. R., Alvarado Bremer, J., & Snodgrass, O. E.
(2021).
Nursery origin and population connectivity of swordfish Xiphias gladius in the North Pacific Ocean. Journal of Fish Biology.
99(2), 354-363.
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conference paper
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Atkins, E. L., Tinhan, T. C., Wells, R., & Alvarado-Bremer, J. R.
(2019).
Estimating levels of gene flow of a large coastal shark, Carcharhinus leucas, in the Gulf of Mexico. INTEGRATIVE AND COMPARATIVE BIOLOGY.
E268-E268.
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Alvarado Bremer, J. R., Hinton, M. G., & Greig, T. W.
(2006).
Evidence of spatial genetic heterogeneity in Pacific swordfish (Xiphias gladius) revealed by the analysis of ldh-A sequences. BULLETIN OF MARINE SCIENCE.
493-503.
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Glenn, T. C., Staton, J. L., Vu, A. T., Davis, L. M., Bremer, J., Rhodes, W. E., Brisbin, I. L., & Sawyer, R. H.
(2002).
Low mitochondrial DNA variation among American alligators and a novel non-coding region in crocodilians. Journal of Experimental Zoology.
312-324.
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Atkins, E. L., Tinhan, T. C., Wells, R., & Alvarado-Bremer, J. R.
(2019).
Estimating levels of gene flow of a large coastal shark, Carcharhinus leucas, in the Gulf of Mexico. INTEGRATIVE AND COMPARATIVE BIOLOGY.
E268-E268.
Research
principal investigator on
- EAGER: Collaborative Research: Acoustic Ecology of Foraging Antarctic Blue Whales in the Vicinity of Antarctic Krill awarded by National Science Foundation - (Arlington, Virginia, United States) 2018 - 2020
- Development of a rapid colorimetric assay based on LAMP to genetically distinguish bluefin tuna (Thunnus thynnus) from other tunas in the field awarded by National Oceanic and Atmospheric Administration - (Washington D.C., District of Columbia, United States) 2015 - 2019
Teaching
teaching activities
- MARB360 Conservation Biology Instructor
- MARB423 Mariculture Instructor
- MARB466 Evolutionary Biology Instructor
- MARB484 Internship Instructor
- MARB491 Hnr: Research Instructor
- MARB685 Directed Studies Instructor
- MARB689 Sptp: Edna Instructor
- MARB689 Sptp: Environmental Dna Instructor
- MARB691 Research Instructor
- MARS685 Directed Studies Instructor
- WFSC685 Directed Studies Instructor
- WFSC685 Directed Studies-gv Instructor
Works By Students
chaired theses and dissertations
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Bangma, Jessica (2009-06). Contemporary population structure and historical demography of sailfish (Istiophorus platypterus) in the Atlantic Ocean.
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Chapman, Alexandra (2012-08). Development of Novel High-Resolution Melting (HRM) Assays for Gender Identification of Caribbean Flamingo (Phoenicopterus ruber ruber) and other Birds.
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Espinoza, Gloria Janelle (2020-07). Comparative Phylogeography, Historical Demography, and Population Genomics of Colonizing Fauna in Restored and Natural Spartina Salt Marshes Along the Northern Gulf of Mexico.
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Lu, Ching-Ping (2014-08). Bayesian Analyses of Genetic Variation and Population Differentiation in Pacific Swordfish (Xiphias gladius L.) and the Development of High Resolution Melting Assays for Species Identification and Potential Sex-Linked Marker Survey in Istiophorid Billfish.
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Smith, Brad 1979- (2012-11). Assessment of the Contemporary Population Structure and Admixture of Atlantic Swordfish (Xiphias gladius L.) via Mixed Stock Analysis and Bayesian Clustering of Multiple Nuclear SNPS Genotyped through High Resolution Melting.
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Stephens, Sarah Holland (2004-09). Genetic analysis of the Kemp's ridley sea turtle (Lepidochelys kempii) and estimates of effective population size.
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Webb, Michael Scott (2004-09). Intraspecific relationships among the stygobitic shrimp Typhlatya mitchelli, by analyzing sequence data from mitochondrial DNA.
Background
education and training
- Ph.D. in Ichthyology & Genetics, University of Toronto - (Toronto, Ontario, Canada) 1994
- M.S. in Zoology, University of Toronto - (Toronto, Ontario, Canada) 1988
- B.S. in Biology, Universidad Autonoma Metropolitana - (Mexico City, Distrito Federal, Mexico) 1983
Contact
first name
- Jaime
has last name
- Alvarado-Bremer
Other
- jaimeab@tamu.edu