A narrow quantitative trait locus in C. elegans coordinately affects longevity, thermotolerance, and resistance to paraquat. Academic Article uri icon

abstract

  • By linkage mapping of quantitative trait loci, we previously identified at least 11 natural genetic variants that significantly modulate Caenorhabditis elegans life-span (LS), many of which would have eluded discovery by knock-down or mutation screens. A region on chromosome IV between markers stP13 and stP35 had striking effects on longevity in three inter-strain crosses (each P<10(-9)). In order to define the limits of that interval, we have now constructed two independent lines by marker-based selection during 20 backcross generations, isolating the stP13-stP35 interval from strain Bergerac-BO in a CL2a background. These congenic lines differed significantly from CL2a in LS, assayed in two environments (each P<0.001). We then screened for exchange of flanking markers to isolate recombinants that partition this region, because fine-mapping the boundaries for overlapping heteroallelic spans can greatly narrow the implicated interval. Recombinants carrying the CL2a allele at stP35 were consistently long-lived compared to those retaining the Bergerac-BO allele (P<0.001), and more resistant to temperature elevation and paraquat (each 1.7-fold, P<0.0001), but gained little protection from ultraviolet or peroxide stresses. Two rounds of recombinant screening, followed by fine-mapping of break-points and survival testing, narrowed the interval to 0.18Mb (13.35-13.53Mb) containing 26 putative genes and six small-nuclear RNAs - a manageable number of targets for functional assessment.

published proceedings

  • Front Genet

author list (cited authors)

  • Vertino, A., Ayyadevara, S., Thaden, J. J., & Shmookler Reis, R. J.

citation count

  • 10

complete list of authors

  • Vertino, Anthony||Ayyadevara, Srinivas||Thaden, John J||Shmookler Reis, Robert J

publication date

  • January 2011