Supersonic MiB Conference Paper

abstract

• A novel assembly pipeline, MiB, employs Minimum Description Length (MDL), de-Bruijn graphs and Bayesian estimation for reference assisted assembly of the novel genome. In a previous study MiB assembly was compared with nine other assembly algorithms showing significant improvement in results coupled with very large execution times. This correspondence introduces 'Supersonic MiB', an extension to our previous study MiB. Supersonic MiB aims to stimulate the assembly pipeline of MiB showing significant improvement in execution time compared to its predecessor. 2013 IEEE.

name of conference

• 2013 IEEE International Workshop on Genomic Signal Processing and Statistics

authors

• Nounou, Hazem
• Nounou, Mohamed
• Serpedin, Erchin

published proceedings

• 2013 IEEE INTERNATIONAL WORKSHOP ON GENOMIC SIGNAL PROCESSING AND STATISTICS (GENSIPS 2013)

author list (cited authors)

• Wajid, B., Ekti, A. R., Noor, A., Serpedin, E., Ayyaz, M. N., Nounou, H., & Nounou, M.

citation count

• 3

complete list of authors

• Wajid, Bilal||Ekti, Ali Riza||Noor, Amina||Serpedin, Erchin||Ayyaz, Muhammad Naseem||Nounou, Hazem||Nounou, Mohamed

publication date

• November 2013

publisher

• Institute of Electrical and Electronics Engineers (IEEE)  Publisher

published in

• IEEE International Workshop on Genomic Signal Processing and Statistics : [proceedings]. IEEE International Workshop on Genomic Signal Processing and Statistics  Journal

keywords

• 31 Biological Sciences
• 3102 Bioinformatics And Computational Biology
• 40 Engineering

Digital Object Identifier (DOI)

• 10.1109/gensips.2013.6735941

International Standard Book Number (ISBN) 13

• 9781479934621

start page

• 86

end page

• 87

URL

• http://dx.doi.org/10.1109/gensips.2013.6735941