HR job title
- Associate Professor
- Contact Info
- Websites
Reeves, Gregory Associate Professor
Positions
- Associate Professor, Chemical Engineering, College of Engineering
- Overview
- Publications
- Teaching
- Background
- Contact
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Overview
Publications
selected publications
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academicarticle
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Shaikh, R., Larson, N. J., Hanjaya-Putra, D., Zartman, J., Umulis, D. M., Li, L., & Reeves, G. T.
(2024).
Optimal Performance Objectives in the Highly Conserved Bone Morphogenetic Protein Signaling Pathway
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Bandodkar, P., Shaikh, R., & Reeves, G. T.
(2023).
ISRES+: an improved evolutionary strategy for function minimization to estimate the free parameters of systems biology models. Bioinformatics.
39(7), btad403.
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McArthur, N., Cruz-Teran, C., Thatavarty, A., Reeves, G. T., & Rao, B. M.
(2022).
Experimental and Analytical Framework for "Mix-and-Read" Assays Based on Split Luciferase. ACS Omega.
7(28), 24551-24560.
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Bowen, J., Schloop, A. E., Reeves, G. T., Menegatti, S., & Rao, B. M.
(2020).
Discovery of Membrane-Permeating Cyclic Peptides via mRNA Display. Bioconjugate Chemistry.
31(10), 2325-2338.
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Schloop, A. E., Carrell-Noel, S., Friedman, J., Thomas, A., & Reeves, G. T.
(2020).
Mechanism and implications of morphogen shuttling: Lessons learned from dorsal and Cactus in Drosophila. Developmental Biology.
461(1), 13-18.
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Al Asafen, H., Bandodkar, P. U., Carrell-Noel, S., Schloop, A. E., Friedman, J., & Reeves, G. T.
(2020).
Robustness of the Dorsal morphogen gradient with respect to morphogen dosage. PLoS Computational Biology.
16(4), e1007750-e1007750.
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Reeves, G., Bandodkar, P., & Asafen, H. A.
(2020).
Spatiotemporal control of gene expression boundaries using a feedforward loop. 34(S1), 1-1.
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Bandodkar, P. U., Al Asafen, H., & Reeves, G. T.
(2020).
Spatiotemporal control of gene expression boundaries using a feedforward loop. Developmental Dynamics.
249(3), 369-382.
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Jacobsen, T., Yi, G., Al Asafen, H., Jermusyk, A. A., Beisel, C. L., & Reeves, G. T.
(2020).
Tunable self-cleaving ribozymes for modulating gene expression in eukaryotic systems. PLoS ONE.
15(4), e0232046-e0232046.
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Reeves, G. T.
(2019).
The engineering principles of combining a transcriptional incoherent feedforward loop with negative feedback. Journal of Biological Engineering.
13(1), 62.
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Asafen, H. A., Bandodkar, P. U., Carrell-Noel, S., & Reeves, G. T.
(2019).
Robustness of the Dorsal morphogen gradient with respect to morphogen dosage. 739292.
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Jermusyk, A. A., Gharavi, S. E., Tingare, A. S., & Reeves, G. T.
(2018).
Determination of novel members in the Drosophila melanogaster anteriorposterior patterning system using natural variation. 319434.
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Asafen, H. A., Clark, N. M., Jacobsen, T., Sozzani, R., & Reeves, G. T.
(2018).
Dorsal/NF-B exhibits a dorsal-to-ventral mobility gradient in the Drosophila embryo. 320754.
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Carrell, S. N., O'Connell, M. D., Jacobsen, T., Pomeroy, A. E., Hayes, S. M., & Reeves, G. T.
(2017).
A facilitated diffusion mechanism establishes the Drosophila Dorsal gradient. Development.
144(23), 4450-4461.
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Jermusyk, A. A., Murphy, N. P., & Reeves, G. T.
(2016).
Analyzing negative feedback using a synthetic gene network expressed in the Drosophila melanogaster embryo. BMC Systems Biology.
10(1), 85.
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Reeves, G. T., & Hrischuk, C. E.
(2016).
Survey of Engineering Models for Systems Biology. Computational Biology Journal.
2016, 1-12.
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O'Connell, M. D., & Reeves, G. T.
(2015).
The presence of nuclear cactus in the early Drosophila embryo may extend the dynamic range of the dorsal gradient. PLoS Computational Biology.
11(4), e1004159-e1004159.
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Carrell, S. N., & Reeves, G. T.
(2015).
Imaging the dorsal-ventral axis of live and fixed Drosophila melanogaster embryos. Methods in molecular biology (Clifton, N.J.).
1189, 63-78.
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Garcia, M., Nahmad, M., Reeves, G. T., & Stathopoulos, A.
(2013).
Size-dependent regulation of dorsal-ventral patterning in the early Drosophila embryo. Developmental Biology.
381(1), 286-299.
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Trisnadi, N., Altinok, A., Stathopoulos, A., & Reeves, G. T.
(2013).
Image analysis and empirical modeling of gene and protein expression. Methods.
62(1), 68-78.
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Reeves, G. T., Trisnadi, N., Truong, T. V., Nahmad, M., Katz, S., & Stathopoulos, A.
(2012).
Dorsal-ventral gene expression in the Drosophila embryo reflects the dynamics and precision of the dorsal nuclear gradient. Developmental Cell.
22(3), 544-557.
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Nahmad, M., Reeves, G., & Stathopoulos, A.
(2011).
Size-dependent regulation of dorsal-ventral patterning in the early Drosophila embryo. Developmental Biology.
356(1), 119-119.
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McMahon, A., Reeves, G. T., Supatto, W., & Stathopoulos, A.
(2010).
Mesoderm migration in Drosophila is a multi-step process requiring FGF signaling and integrin activity. Development.
137(13), 2167-2175.
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Liberman, L. M., Reeves, G. T., & Stathopoulos, A.
(2009).
Quantitative imaging of the Dorsal nuclear gradient reveals limitations to threshold-dependent patterning in Drosophila. Proceedings of the National Academy of Sciences of the United States of America.
106(52), 22317-22322.
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Reeves, G. T., & Stathopoulos, A.
(2009).
Graded dorsal and differential gene regulation in the Drosophila embryo. Cold Spring Harbor Perspectives in Biology.
1(4), a000836-a000836.
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Reeves, G. T., & Fraser, S. E.
(2009).
Biological systems from an engineer's point of view. PLoS Biology.
7(1), e21-35.
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Reeves, G. T., Muratov, C. B., Schpbach, T., & Shvartsman, S. Y.
(2006).
Quantitative models of developmental pattern formation. Developmental Cell.
11(3), 289-300.
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Goentoro, L. A., Reeves, G. T., Kowal, C. P., Martinelli, L., Schpbach, T., & Shvartsman, S. Y.
(2006).
Quantifying the Gurken morphogen gradient in Drosophila oogenesis. Developmental Cell.
11(2), 263-272.
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Reeves, G. T., Kalifa, R., Klein, D. E., Lemmon, M. A., & Shvartsman, S. Y.
(2005).
Computational analysis of EGFR inhibition by Argos. Developmental Biology.
284(2), 523-535.
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Pilyugin, S. S., Reeves, G. T., & Narang, A.
(2004).
Predicting stability of mixed microbial cultures from single species experiments: 1. Phenomenological model. Mathematical Biosciences.
192(2), 85-109.
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Pilyugin, S. S., Reeves, G. T., & Narang, A.
(2004).
Predicting stability of mixed microbial cultures from single species experiments: 2. Physiological model. Mathematical Biosciences.
192(2), 111-136.
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Klein, D. E., Nappi, V. M., Reeves, G. T., Shvartsman, S. Y., & Lemmon, M. A.
(2004).
Argos inhibits epidermal growth factor receptor signalling by ligand sequestration. Nature.
430(7003), 1040-1044.
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Reeves, G. T., Narang, A., & Pilyugin, S. S.
(2004).
Growth of mixed cultures on mixtures of substitutable substrates: the operating diagram for a structured model. Journal of Theoretical Biology.
226(2), 143-157.
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Shoemaker, J., Reeves, G. T., Gupta, S., Pilyugin, S. S., Egli, T., & Narang, A.
(2003).
The dynamics of single-substrate continuous cultures: the role of transport enzymes. Journal of Theoretical Biology.
222(3), 307-322.
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Al Asafen, H., Beseli, A., Chen, H., Hiremath, S., Williams, C. M., & Reeves, G. T.
Dynamics of BMP signaling and stable gene expression in the early Drosophila embryo. Biology Open.
13(9), bio061646.
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Shaikh, R., Larson, N. J., Kam, J., Hanjaya-Putra, D., Zartman, J., Umulis, D. M., Li, L., & Reeves, G. T.
Optimal performance objectives in the highly conserved bone morphogenetic protein signaling pathway. npj Systems Biology and Applications.
10(1), 103.
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Shaikh, R., Larson, N. J., Hanjaya-Putra, D., Zartman, J., Umulis, D. M., Li, L., & Reeves, G. T.
(2024).
Optimal Performance Objectives in the Highly Conserved Bone Morphogenetic Protein Signaling Pathway
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chapter
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Schloop, A. E., Bandodkar, P. U., & Reeves, G. T.
(2020).
Formation, interpretation, and regulation of the Drosophila Dorsal/NF-B gradient. Current Topics in Developmental Biology.
Small, S., & Briscoe, J. (Eds.),
GRADIENTS AND TISSUE PATTERNING.
(pp. 143-191).
Elsevier.
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Jermusyk, A. A., & Reeves, G. T.
(2016).
Transcription Factor Networks. Encyclopedia of Cell Biology.
(pp. 232-241).
Elsevier.
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Jermusyk, A. A., & Reeves, G. T.
(2016).
Transcription Factor Networks. Encyclopedia of Cell Biology.
(pp. 63-71).
Elsevier.
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Schloop, A. E., Bandodkar, P. U., & Reeves, G. T.
(2020).
Formation, interpretation, and regulation of the Drosophila Dorsal/NF-B gradient. Current Topics in Developmental Biology.
Small, S., & Briscoe, J. (Eds.),
GRADIENTS AND TISSUE PATTERNING.
(pp. 143-191).
Elsevier.
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institutional repository document
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Schloop, A. E., Hiremath, S., Shaikh, R., Williams, C. M., & Reeves, G. T.
(2024).
Spatiotemporal dynamics of NF-B/Dorsal inhibitor IB/Cactus in Drosophila blastoderm embryos
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Bandodkar, P. U., Shaikh, R. R., & Reeves, G. T.
(2023).
ISRES+: An improved evolutionary strategy for function minimization to estimate the free parameters of Systems Biology models
-
Asafen, H., Beseli, A., Hiremath, S., Williams, C. M., & Reeves, G. T.
(2022).
Dynamics of BMP signaling in the early Drosophila embryo
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McArthur, N., Cruz-Teran, C., Thatavarty, A., Reeves, G. T., & Rao, B. M.
(2022).
Experimental and analytical framework for mix-and-read assays based on split luciferase
-
Bowen, J., Schloop, A. E., Reeves, G. T., Menegatti, S., & Rao, B. M.
(2020).
Discovery of membrane-permeating cyclic peptides via mRNA display
-
Bandodkar, P. U., Asafen, H. A., & Reeves, G. T.
(2019).
Spatiotemporal control of gene expression boundaries using a feedforward loop
-
Schloop, A. E., Carrell-Noel, S., & Reeves, G. T.
(2019).
Shuttling of Dorsal by Cactus: mechanism and implications
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Jacobsen, T., Yi, G., Asafen, H. A., Jermusyk, A. A., Beisel, C. L., & Reeves, G. T.
(2019).
Tunable self-cleaving ribozymes for modulating gene expression in eukaryotic systems
-
Carrell, S. N., OConnell, M. D., Allen, A. E., Smith, S. M., & Reeves, G. T.
(2016).
A Facilitated Diffusion Mechanism Establishes the Drosophila Dorsal Gradient
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Dima, S. S., & Reeves, G. T.
Bulk-level maps of pioneer factor binding dynamics during Drosophila maternal-to-zygotic transition
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Shaikh, R., & Reeves, G. T.
Elucidating the role of multiple feedback loops in regulating stem cell decisions
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Schloop, A. E., Hiremath, S., Shaikh, R., Williams, C. M., & Reeves, G. T.
(2024).
Spatiotemporal dynamics of NF-B/Dorsal inhibitor IB/Cactus in Drosophila blastoderm embryos
Teaching
teaching activities
- CHEN205 Chem Engr Thermo I Instructor
- CHEN291 Hnr-research Instructor
- CHEN320 Chen Analysis Instructor
- CHEN461 Process Dynamics & Cntrl Instructor
- CHEN489 Sptp: Eng Principles Of Cell Instructor
- CHEN491 Hnr-research Instructor
- CHEN689 Sptp:eng Principles Of Cell Instructor
- CHEN691 Research Instructor
- GENE691 Research Instructor
Background
education and training
- Ph.D. in Chemical Engineering, Princeton University - (Princeton, New Jersey, United States) 2008
- B.S. in Mathematics, University of Florida - (Gainesville, Florida, United States) 2002
awards and honors
Contact
first name
- Gregory
has last name
- Reeves
Other
- gtreeves@tamu.edu