HR job title
- Assistant Professor
- Contact Info
- Websites
- ORCiD
- 0000-0003-2951-0541
Jayakodi, Murukarthick Assistant Professor
Positions
- Assistant Professor, Soil and Crop Sciences, College of Agriculture and Life Sciences
Research Areas
- Overview
- Publications
- Contact
- Other
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Overview
Publications
selected publications
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academicarticle
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Jang, W., Kim, N., Lee, J., Waminal, N. E., Lee, S., Jayakodi, M., ... Yang, T.
A Glimpse of Panax ginseng Genome Structure Revealed from Ten BAC Clone Sequences Obtained by SMRT Sequencing Platform. Plant Breeding and Biotechnology.
5(1), 25-35.
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Jang, W., Kim, N., Lee, J., Waminal, N. E., Lee, S., Jayakodi, M., ... Yang, T.
A Glimpse of Panax ginseng Genome Structure Revealed from Ten BAC Clone Sequences Obtained by SMRT Sequencing Platform. Plant Breeding and Biotechnology.
5(1), 25-35.
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Jayakodi, M., Selvan, S. G., Natesan, S., Muthurajan, R., Duraisamy, R., Ramineni, J. J., ... Chokkappan, M.
A web accessible resource for investigating cassava phenomics and genomics information: BIOGEN BASE. Bioinformation.
6(10), 391-392.
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Zhang, H., Mascher, M., Abbo, S., & Jayakodi, M.
Advancing Grain Legumes Domestication and Evolution Studies with Genomics. Plant and Cell Physiology.
63(11), 1540-1553.
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Yu, G., Matny, O., Champouret, N., Steuernagel, B., Moscou, M. J., Hernndez-Pinzn, I., ... Wulff, B.
Aegilops sharonensis genome-assisted identification of stem rust resistance gene Sr62. Nature Communications.
13(1), 1607.
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Joh, H. J., Kim, N., Jayakodi, M., Jang, W., Park, J. Y., Kim, Y. C., In, J., & Yang, T.
Authentication of Golden-Berry P. ginseng Cultivar Gumpoong from a Landrace Hwangsook Based on Pooling Method Using Chloroplast-Derived Markers. Plant Breeding and Biotechnology.
5(1), 16-24.
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Joh, H. J., Kim, N., Jayakodi, M., Jang, W., Park, J. Y., Kim, Y. C., In, J., & Yang, T.
Authentication of Golden-Berry P. ginseng Cultivar Gumpoong from a Landrace Hwangsook Based on Pooling Method Using Chloroplast-Derived Markers. Plant Breeding and Biotechnology.
5(1), 16-24.
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Park, H., Jayakodi, M., Lee, S. H., Jeon, J., Lee, H., Park, J. Y., ... Yang, T.
Author Correction: Mitochondrial plastid DNA can cause DNA barcoding paradox in plants. Scientific Reports.
11(1), 9599.
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Murukarthick, J., Sampath, P., Lee, S. C., Choi, B., Senthil, N., Liu, S., & Yang, T.
BrassicaTED - a public database for utilization of miniature transposable elements in Brassica species. BMC Research Notes.
7(1), 379.
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Jayakodi, M., Schreiber, M., Stein, N., & Mascher, M.
Building pan-genome infrastructures for crop plants and their use in association genetics. DNA Research.
28(1), dsaa030.
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Yuan, Z., Rembe, M., Mascher, M., Stein, N., Jayakodi, M., Brner, A., ... El Hanafi, S.
Capitalizing genebank core collections for rare and novel disease resistance loci to enhance barley resilience. Journal of Experimental Botany.
erae283.
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Lee, Y. S., Park, H., Lee, D., Jayakodi, M., Kim, N., Lee, S., ... Yang, T.
Comparative analysis of the transcriptomes and primary metabolite profiles of adventitious roots of five Panax ginseng cultivars. Journal of Ginseng Research.
41(1), 60-68.
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Jayakodi, M., Lee, S., & Yang, T.
Comparative transcriptome analysis of heat stress responsiveness between two contrasting ginseng cultivars. Journal of Ginseng Research.
43(4), 572-579.
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Kim, K., Lee, S., Lee, J., Yu, Y., Yang, K., Choi, B., ... Yang, T.
Complete chloroplast and ribosomal sequences for 30 accessions elucidate evolution of Oryza AA genome species. Scientific Reports.
5(1), 15655.
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Jayakodi, M., Lee, S., Lee, Y. S., Park, H., Kim, N., Jang, W., ... Yang, T.
Comprehensive analysis of Panax ginseng root transcriptomes. BMC Plant Biology.
15(1), 138.
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Subbulakshmi, K., Karthikeyan, A., Murukarthick, J., Dhasarathan, M., Naveen, R., Sathya, M., ... Senthil, N.
Consensus genetic linkage map and QTL mapping allow to capture the genomic regions associated with agronomic traits in pearl millet. Planta.
260(3), 57.
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Mathivathana, M. K., Murukarthick, J., Karthikeyan, A., Jang, W., Dhasarathan, M., Jagadeeshselvam, N., ... Senthil, N.
Detection of QTLs associated with mungbean yellow mosaic virus (MYMV) resistance using the interspecific cross of Vigna radiata Vigna umbellata. Journal of Applied Genetics.
60(3-4), 255-268.
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Kim, I., Park, J. Y., Lee, Y. S., Lee, H. O., Park, H., Jayakodi, M., ... Yang, T.
Discrimination and Authentication of Eclipta prostrata and E. alba Based on the Complete Chloroplast Genomes. Plant Breeding and Biotechnology.
5(4), 334-343.
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Huang, Y., Maurer, A., Giehl, R., Zhao, S., Golan, G., Thirulogachandar, V., ... Schnurbusch, T.
Dynamic Phytomeric Growth Contributes to Local Adaptation in Barley. Molecular Biology and Evolution (MBE).
41(2), msae011.
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Sudha, M., Karthikeyan, A., Madhumitha, B., Veera Ranjani, R., Kanimoli Mathivathana, M., Dhasarathan, M., ... Raveendran, M.
Dynamic Transcriptome Profiling of Mungbean Genotypes Unveil the Genes Respond to the Infection of Mungbean Yellow Mosaic Virus. Pathogens.
11(2), 190-190.
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Manimekalai, M., Dhasarathan, M., Karthikeyan, A., Murukarthick, J., Renganathan, V. G., Thangaraj, K., ... Senthil, N.
Genetic diversity in the barnyard millet (Echinochola frumentacea) germplasms revealed by morphological traits and simple sequence repeat markers. Current Plant Biology.
14, 71-78.
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Kim, N., Jayakodi, M., Lee, S., Choi, B., Jang, W., Lee, J., ... Yang, T.
Genome and evolution of the shade-requiring medicinal herb Panax ginseng. Plant Biotechnology Journal.
16(11), 1904-1917.
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Lee, J., Izzah, N. K., Jayakodi, M., Perumal, S., Joh, H. J., Lee, H. J., ... Yang, T.
Genome-wide SNP identification and QTL mapping for black rot resistance in cabbage. BMC Plant Biology.
15(1), 32.
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Jayakodi, M., Jung, J. W., Park, D., Ahn, Y., Lee, S., Shin, S., ... Kwon, H. W.
Genome-wide characterization of long intergenic non-coding RNAs (lincRNAs) provides new insight into viral diseases in honey bees Apis cerana and Apis mellifera. BMC GENOMICS.
16(1), 680.
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Sampath, P., Murukarthick, J., Izzah, N. K., Lee, J., Choi, H., Shirasawa, K., ... Yang, T.
Genome-wide comparative analysis of 20 miniature inverted-repeat transposable element families in Brassica rapa and B. oleracea. PLoS ONE.
9(4), e94499-e94499.
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Jayakodi, M., Choi, B., Lee, S., Kim, N., Park, J. Y., Jang, W., ... Yang, T.
Ginseng Genome Database: an open-access platform for genomics of Panax ginseng. BMC Plant Biology.
18(1), 62.
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Thirulogachandar, V., Govind, G., Hensel, G., Kale, S. M., Kuhlmann, M., Eschen-Lippold, L., ... Sreenivasulu, N.
HOMEOBOX2, the paralog of SIX-ROWED SPIKE1/HOMEOBOX1, is dispensable for barley spikelet development. Journal of Experimental Botany.
75(10), 2900-2916.
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Wang, Y., Habeku, A., Jayakodi, M., Mascher, M., Snowdon, R. J., Stahl, A., ... Perovic, D.
High-Resolution Mapping of Barley mild mosaic virus Resistance Gene rym15. Frontiers in Plant Science.
13, 908170.
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Kang, K. B., Jayakodi, M., Lee, Y. S., Nguyen, V. B., Park, H., Koo, H. J., ... Yang, T.
Identification of candidate UDP-glycosyltransferases involved in protopanaxadiol-type ginsenoside biosynthesis in Panax ginseng. Scientific Reports.
8(1), 11744.
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Muqaddasi, Q. H., Jayakodi, M., Brner, A., & Rder, M. S.
Identification of consistent QTL with large effect on anther extrusion in doubled haploid populations developed from spring wheat accessions in German Federal ex situ Genebank. Theoretical and Applied Genetics.
132(11), 3035-3045.
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Van Binh, N., Kim, M. J., Giang, V., Lee, Y. S., Jayakodi, M., Park, H., ... Yang, T.
Improved biomass and metabolite production in hairy root culture in various genotypes of Panax ginseng through genetic transformation. Plant Cell, Tissue and Organ Culture.
156(2), 43.
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Lee, Y. S., Park, H., Lee, D., Jayakodi, M., Kim, N., Koo, H. J., ... Yang, T.
Integrated Transcriptomic and Metabolomic Analysis of Five Panax ginseng Cultivars Reveals the Dynamics of Ginsenoside Biosynthesis. Frontiers in Plant Science.
8, 1048.
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Park, H., Jayakodi, M., Lee, S. H., Jeon, J., Lee, H., Park, J. Y., ... Yang, T.
Mitochondrial plastid DNA can cause DNA barcoding paradox in plants. Scientific Reports.
10(1), 6112.
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Zhang, H., Fechete, L. I., Himmelbach, A., Poehlein, A., Lohwasser, U., Brner, A., ... Jayakodi, M.
Optimization of GenotypingbySequencing (GBS) for Germplasm Fingerprinting and Trait Mapping in Faba Bean. 6(3),
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Senthil, N., Murukarthick, J., Pandiyan, M., Karthikeyan, A., Sudha, M., Raveendran, M., ... Nagarajan, P.
Paithumbase - Biometrical Traits based Query System for Studying Mungbean [Vigna radiata (L. ) Wilczek] Phenomics. 4(10), 36-39.
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Schreiber, M., Jayakodi, M., Stein, N., & Mascher, M.
Plant pangenomes for crop improvement, biodiversity and evolution. Nature Reviews Genetics.
25(8), 563-577.
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Sankaran, D., Adhimoolam, K., Jayakodi, M., Manickam, S., Mannu, J., & Natesan, S.
Progress in genomic-driven breeding for improving the disease and insect pest resistance in black gram (Vigna mungo). Physiological and Molecular Plant Pathology.
133, 102368-102368.
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Mascher, M., Jayakodi, M., Shim, H., & Stein, N.
Promises and challenges of crop translational genomics. Nature.
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Mariyammal, I., Seram, D., Samyuktha, S. M., Karthikeyan, A., Dhasarathan, M., Murukarthick, J., ... Senthil, N.
QTL mapping in Vigna radiata Vigna umbellata population uncovers major genomic regions associated with bruchid resistance. Molecular Breeding.
39(7), 110.
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Waminal, N. E., Pellerin, R. J., Kim, N., Jayakodi, M., Park, J. Y., Yang, T., & Kim, H. H.
Rapid and Efficient FISH using Pre-Labeled Oligomer Probes. Scientific Reports.
8(1), 8224.
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Kim, C., Seol, Y., Perumal, S., Lee, J., Waminal, N. E., Jayakodi, M., ... Yang, T.
Re-exploration of U's Triangle Brassica Species Based on Chloroplast Genomes and 45S nrDNA Sequences. Scientific Reports.
8(1), 7353.
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Jayakodi, M., Lu, Q., Pidon, H., Rabanus-Wallace, M. T., Bayer, M., Lux, T., ... Stein, N.
Structural variation in the pangenome of wild and domesticated barley. Nature.
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Jayakodi, M., Schreiber, M., & Mascher, M.
Sweet genes in melon and watermelon. Nature Genetics.
51(11), 1572-1573.
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Kim, I., Park, J. Y., Lee, Y. S., Joh, H. J., Kang, S. J., Murukarthick, J., ... Yang, T.
The Complete Chloroplast Genome Sequence and Intra-Species Diversity of Rhus chinensis. Plant Breeding and Biotechnology.
5(3), 243-251.
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Jayakodi, M., Padmarasu, S., Haberer, G., Bonthala, V. S., Gundlach, H., Monat, C., ... Stein, N.
The barley pan-genome reveals the hidden legacy of mutation breeding. Nature.
588(7837), 284-289.
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Perumal, S., Jayakodi, M., Kim, D., Yang, T., & Natesan, S.
The complete chloroplast genome sequence of Indian barnyard millet, Echinochloa frumentacea (Poaceae). Mitochondrial DNA Part B: Resources.
1(1), 79-80.
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Jayakodi, M., Golicz, A. A., Kreplak, J., Fechete, L. I., Angra, D., Bedn, P., ... Andersen, S. U.
The giant diploid faba genome unlocks variation in a global protein crop. Nature.
615(7953), 652-659.
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Mascher, M., Jayakodi, M., & Stein, N.
The reinvention of potato. Cell Research.
31(11), 1144-1145.
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Senthil, K., Jayakodi, M., Thirugnanasambantham, P., Lee, S. C., Duraisamy, P., Purushotham, P. M., ... Yang, T. J.
Transcriptome analysis reveals in vitro cultured Withania somnifera leaf and root tissues as a promising source for targeted withanolide biosynthesis. BMC GENOMICS.
16(1), 14.
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Jayakodi, M., Lee, S., Park, H., Jang, W., Lee, Y. S., Choi, B., ... Yang, T.
Transcriptome profiling and comparative analysis of Panax ginseng adventitious roots. Journal of Ginseng Research.
38(4), 278-288.
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Izzah, N. K., Lee, J., Jayakodi, M., Perumal, S., Jin, M., Park, B., Ahn, K., & Yang, T.
Transcriptome sequencing of two parental lines of cabbage (Brassica oleracea L. var. capitata L.) and construction of an EST-based genetic map. BMC GENOMICS.
15(1), 149.
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Jayakodi, M., Madheswaran, M., Adhimoolam, K., Perumal, S., Manickam, D., Kandasamy, T., Yang, T., & Natesan, S.
Transcriptomes of Indian barnyard millet and barnyardgrass reveal putative genes involved in drought adaptation and micronutrient accumulation. Acta Physiologiae Plantarum.
41(5), 66.
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Park, D., Jung, J. W., Choi, B., Jayakodi, M., Lee, J., Lim, J., ... Kwon, H. W.
Uncovering the novel characteristics of Asian honey bee, Apis cerana, by whole genome sequencing. BMC GENOMICS.
16(1), 1.
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Jang, W., Kim, N., Lee, J., Waminal, N. E., Lee, S., Jayakodi, M., ... Yang, T.
A Glimpse of Panax ginseng Genome Structure Revealed from Ten BAC Clone Sequences Obtained by SMRT Sequencing Platform. Plant Breeding and Biotechnology.
5(1), 25-35.
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chapter
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Jayakodi, M., & Yang, T.
Genomic Resources for Ginseng Genome Studies. The Ginseng Genome.
(pp. 143-148).
Springer Nature.
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Kim, N., Jayakodi, M., & Yang, T.
Ginseng Genome Structure and Evolution. The Ginseng Genome.
(pp. 85-93).
Springer Nature.
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Jayakodi, M., & Yang, T.
Mining of Miniature Transposable Elements in Brassica Species at BrassicaTED. Methods in molecular biology (Clifton, N.J.).
Plant Transposable Elements.
(pp. 69-74).
Springer Nature.
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Kamal, N., Lux, T., Jayakodi, M., Haberer, G., Gundlach, H., Mayer, K., Mascher, M., & Spannagl, M.
The Barley and Wheat Pan-Genomes. Methods in molecular biology (Clifton, N.J.).
Plant Bioinformatics.
(pp. 147-159).
Springer Nature.
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Jayakodi, M., & Yang, T.
Genomic Resources for Ginseng Genome Studies. The Ginseng Genome.
(pp. 143-148).
Springer Nature.
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institutional repository document
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Waugh, R., Guo, W., Schreiber, M., Marosi, V., Bagnaresi, P., Chalmers, K., ... Zhang, R.
A barley pan-transcriptome reveals layers of genotype-dependent transcriptional complexity
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Mascher, M., Feng, J., Pidon, H., Cuacos, M., Himmelbach, A., Fuchs, J., ... Stein, N.
A haplotype-resolved pangenome of the barley wild relative Hordeum bulbosum
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Jayakodi, M., Lu, Q., Pidon, H., Rabanus-Wallace, M. T., Bayer, M., Lux, T., ... Stein, N.
Adaptive diversification through structural variation in barley
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Thirulogachandar, V., Govind, G., Hensel, G., Kale, S. M., Kuhlmann, M., Eschen-Lippold, L., ... Sreenivasulu, N.
Dosage of duplicated and antifunctionalized homeobox proteins influences spikelet development in barley
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Huang, Y., Maurer, A., Giehl, R., Zhao, S., Golan, G., Thirulogachandar, V., ... Schnurbusch, T.
Dynamic phytomeric growth contributes to local adaptation in barley
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Yu, G., Matny, O., Champouret, N., Steuernagel, B., Moscou, M. J., Hernndez-Pinzn, I., ... Wulff, B.
Reference genome-assisted identification of stem rust resistance gene Sr62 encoding a tandem kinase
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Jayakodi, M., Golicz, A. A., Kreplak, J., Fechete, L. I., Angra, D., Bedn, P., ... Andersen, S. U.
The giant diploid faba genome unlocks variation in a global protein crop
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Waugh, R., Guo, W., Schreiber, M., Marosi, V., Bagnaresi, P., Chalmers, K., ... Zhang, R.
A barley pan-transcriptome reveals layers of genotype-dependent transcriptional complexity
Contact
first name
- Murukarthick
has last name
- Jayakodi
Other
- muru.jayakodi@ag.tamu.edu