Early detection of unilateral ureteral obstruction by desorption electrospray ionization mass spectrometry.
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Desorption electrospray ionization mass spectrometry (DESI-MS) is an emerging analytical tool for rapid in situ assessment of metabolomic profiles on tissue sections without tissue pretreatment or labeling. We applied DESI-MS to identify candidate metabolic biomarkers associated with kidney injury at the early stage. DESI-MS was performed on sections of kidneys from 80 mice over a time course following unilateral ureteral obstruction (UUO) and compared to sham controls. A predictive model of renal damage was constructed using the LASSO (least absolute shrinkage and selection operator) method. Levels of lipid and small metabolites were significantly altered and glycerophospholipids comprised a significant fraction of altered species. These changes correlate with altered expression of lipid metabolic genes, with most genes showing decreased expression. However, rapid upregulation of PG(22:6/22:6) level appeared to be a hitherto unknown feature of the metabolic shift observed in UUO. Using LASSO and SAM (significance analysis of microarrays), we identified a set of well-measured metabolites that accurately predicted UUO-induced renal damage that was detectable by 12h after UUO, prior to apparent histological changes. Thus, DESI-MS could serve as a useful adjunct to histology in identifying renal damage and demonstrates early and broad changes in membrane associated lipids.
author list (cited authors)
Banerjee, S., Wong, A., Yan, X., Wu, B. o., Zhao, H., Tibshirani, R. J., Zare, R. N., & Brooks, J. D.
complete list of authors
Banerjee, Shibdas||Wong, Anny Chuu-Yun||Yan, Xin||Wu, Bo||Zhao, Hongjuan||Tibshirani, Robert J||Zare, Richard N||Brooks, James D