Complete genome sequence analysis of a genetic variant of grapevine virus L from the grapevine cultivar Blanc du Bois. Academic Article

abstract

• The complete genome sequences of two grapevine virus L (GVL) isolates collected from the wine grape cultivar Blanc du Bois (Vitis spp.: 'Florida D 6-148''Cardinal') in Texas were determined. The two genome sequences (excluding the polyA tail) were each 7594 nucleotide long and 99.7% identical to each other, but they shared only ~74% identity with those of previously published GVL isolates. Further analysis showed that the two Texas GVL isolates also diverged significantly from previously published isolates of the virus in each of the five ORFs at both the nucleotide and amino acid level, indicating that they represent a new phylogroup of this virus.

authors

• Alabi, Olufemi
• Appel, David

published proceedings

• Arch Virol

altmetric score

• 0.25

author list (cited authors)

• Alabi, O. J., Appel, D. N., McBride, S., Al Rwahnih, M., & Pontasch, F. M.

citation count

• 3

complete list of authors

• Alabi, Olufemi J||Appel, David N||McBride, Sheila||Al Rwahnih, Maher||Pontasch, Fran M

publication date

• January 2020

publisher

• Springer Nature  Publisher

published in

• Archives of Virology  Journal

keywords

• Flexiviridae
• Florida
• Genome, Viral
• Open Reading Frames
• Phylogeny
• Plant Diseases
• Sequence Analysis
• Texas
• Vitis

PubMed Central ID

• 32472290

Digital Object Identifier (DOI)

• 10.1007/s00705-020-04682-8

start page

• 1905

end page

• 1909

volume

• 165

issue

• 8

URL

• http://dx.doi.org/10.1007/s00705-020-04682-8