Distance measure-based algorithm for identification of protein complexes Academic Article

abstract

• IPC-DM, is proposed based on our discovery that most of the shortest paths between proteins complexes are no more than two. A new seed-extension model is also proposed to improve the precision of protein complexes discovery. Experiment results on yeast protein interaction network show that more known protein complexes are recalled by IPC-DM than by other typical algorithms: MCODE, ENSC, CFinder, LCMA and DPClus.

authors

• Chen, Jianer

published proceedings

• Jilin Daxue Xuebao (Gongxueban)/Journal of Jilin University (Engineering and Technology Edition)

author list (cited authors)

• Li, M., Wang, J. X., & Chen, J. E.

complete list of authors

• Li, M||Wang, JX||Chen, JE

publication date

• September 2010

published in

• Jilin Daxue Xuebao (Gongxueban)/Journal of Jilin University (Engineering and Technology Edition)  Journal

start page

• 1318

end page

• 1323

volume

• 40

issue

• 5