SBEToolbox: A Matlab Toolbox for Biological Network Analysis Academic Article uri icon

abstract

  • We present SBEToolbox (Systems Biology and Evolution Toolbox), an open-source Matlab toolbox for biological network analysis. It takes a network file as input, calculates a variety of centralities and topological metrics, clusters nodes into modules, and displays the network using different graph layout algorithms. Straightforward implementation and the inclusion of high-level functions allow the functionality to be easily extended or tailored through developing custom plugins. SBEGUI, a menu-driven graphical user interface (GUI) of SBEToolbox, enables easy access to various network and graph algorithms for programmers and non-programmers alike. All source code and sample data are freely available at https://github.com/biocoder/SBEToolbox/releases.

altmetric score

  • 0.5

author list (cited authors)

  • Konganti, K., Wang, G., Yang, E., & Cai, J. J.

citation count

  • 37

complete list of authors

  • Konganti, Kranti||Wang, Gang||Yang, Ence||Cai, James J

publication date

  • January 2013