The A, C, G, and T of Genome Assembly. Academic Article

abstract

• Genome assembly in its two decades of history has produced significant research, in terms of both biotechnology and computational biology. This contribution delineates sequencing platforms and their characteristics, examines key steps involved in filtering and processing raw data, explains assembly frameworks, and discusses quality statistics for the assessment of the assembled sequence. Furthermore, the paper explores recent Ubuntu-based software environments oriented towards genome assembly as well as some avenues for future research.

authors

• Serpedin, Erchin

published proceedings

• Biomed Res Int

altmetric score

• 1

author list (cited authors)

• Wajid, B., Sohail, M. U., Ekti, A. R., & Serpedin, E.

citation count

• 9

complete list of authors

• Wajid, Bilal||Sohail, Muhammad U||Ekti, Ali R||Serpedin, Erchin

publication date

• January 2016

publisher

• Hindawi  Publisher

published in

• n2314-6133ISSN  Journal

keywords

• Genome, Human
• Humans
• Sequence Analysis, DNA
• Software

PubMed Central ID

• 27247941

Digital Object Identifier (DOI)

• 10.1155/2016/6329217

URI

• https://hdl.handle.net/1969.1/181234

start page

• 6329217

end page

• 10

volume

• 2016

URL

• http%3A%2F%2Fdx.doi.org%2F10.1155%2F2016%2F6329217